. Finally, gene ontology analysis revealedthat the direct targets of SEP3 had a functional bias similar to thatfound in the transcriptome of early buds, with enrichment for genesencoding transcription factors, genes involved in the synthesis andresponse to hormones (particularly auxin) and in lipid metabolism.In summary, early and direct targets of organ identity targets areenriched for genes encoding transcription factors and include theorgan identity genes themselves, whose expression is maintainedby auto-regulatory loops. Genes involved in hormone synthesis andresponses also feature prominently among the target genes. Thesets of targets change as development progresses and ultimatelyorgan identity genes modify the expression of thousands of genes,particularly in reproductive organs.
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